3D structure

PDB id
7RYH (explore in PDB, NAKB, or RNA 3D Hub)
Description
A. baumannii Ribosome-TP-6076 complex: Empty 70S
Experimental method
ELECTRON MICROSCOPY
Resolution
2.43 Å

Loop

Sequence
UUAAC*GGGAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7RYH_015 not in the Motif Atlas
Homologous match to IL_7RQB_016
Geometric discrepancy: 0.1315
The information below is about IL_7RQB_016
Detailed Annotation
AAA cross-strand stack
Broad Annotation
AAA cross-strand stack
Motif group
IL_17136.1
Basepair signature
cWW-tSH-tHW-tHS-cWW
Number of instances in this motif group
24

Unit IDs

7RYH|1|A|U|604
7RYH|1|A|U|605
7RYH|1|A|A|606
7RYH|1|A|A|607
7RYH|1|A|C|608
*
7RYH|1|A|G|616
7RYH|1|A|G|617
7RYH|1|A|G|618
7RYH|1|A|A|619
7RYH|1|A|G|620

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain E
50S ribosomal protein L4
Chain K
50S ribosomal protein L15

Coloring options:


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