IL_7RYH_024

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

ACGAA*UAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYH_024 not in the Motif Atlas

Geometric match to IL_5TBW_145

Geometric discrepancy: 0.3239

The information below is about IL_5TBW_145

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_54650.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

7RYH|1|A|A|841
7RYH|1|A|C|842
7RYH|1|A|G|843
7RYH|1|A|A|844
7RYH|1|A|A|845
*
7RYH|1|A|U|930
7RYH|1|A|A|931
7RYH|1|A|U|932

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain Y

50S ribosomal protein L30