IL_7RYH_048

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GAAG*CAUGC

Length

9 nucleotides

Bulged bases

7RYH|1|A|U|1557

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYH_048 not in the Motif Atlas

Homologous match to IL_5J7L_296

Geometric discrepancy: 0.2982

The information below is about IL_5J7L_296

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_58112.2

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

4

Unit IDs

7RYH|1|A|G|1427
7RYH|1|A|A|1428
7RYH|1|A|A|1429
7RYH|1|A|G|1430
*
7RYH|1|A|C|1555
7RYH|1|A|A|1556
7RYH|1|A|U|1557
7RYH|1|A|G|1558
7RYH|1|A|C|1559

Current chains

Chain A

23S ribosomal RNA

Nearby chains