IL_7RYH_058

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

UGAUG*CUGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYH_058 not in the Motif Atlas

Homologous match to IL_5J7L_310

Geometric discrepancy: 0.4649

The information below is about IL_5J7L_310

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

7RYH|1|A|U|1716
7RYH|1|A|G|1717
7RYH|1|A|A|1718
7RYH|1|A|U|1719
7RYH|1|A|G|1720
*
7RYH|1|A|C|1732
7RYH|1|A|U|1733
7RYH|1|A|G|1734
7RYH|1|A|A|1735
7RYH|1|A|G|1736

Current chains

Chain A

23S ribosomal RNA

Nearby chains