IL_7RYH_161

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

G(4OC)CC*G(UR3)AAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 4OC, UR3

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYH_161 not in the Motif Atlas

Homologous match to IL_5J7L_059

Geometric discrepancy: 0.1201

The information below is about IL_5J7L_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65718.4

Basepair signature

cWW-cSH-cWS-cWW-cWW

Number of instances in this motif group

4

Unit IDs

7RYH|1|a|G|1398
7RYH|1|a|4OC|1399
7RYH|1|a|C|1400
7RYH|1|a|C|1401
*
7RYH|1|a|G|1494
7RYH|1|a|UR3|1495
7RYH|1|a|A|1496
7RYH|1|a|A|1497
7RYH|1|a|C|1498

Current chains

Chain a

16S Ribosomal RNA

Nearby chains