IL_7RYH_176

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYH_176 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1646

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7RYH|1|A|U|1847
7RYH|1|A|U|1848
7RYH|1|A|A|1849
7RYH|1|A|A|1850
7RYH|1|A|U|1851
7RYH|1|A|U|1852
7RYH|1|A|G|1853
7RYH|1|A|A|1854
7RYH|1|A|U|1855
7RYH|1|A|G|1856
*
7RYH|1|A|U|1878
7RYH|1|A|U|1879
7RYH|1|A|G|1880
7RYH|1|A|A|1881
7RYH|1|A|U|1882
7RYH|1|A|C|1883
7RYH|1|A|G|1884
7RYH|1|A|A|1885
7RYH|1|A|A|1886
7RYH|1|A|G|1887

Current chains

Chain A

23S ribosomal RNA

Nearby chains