IL_7S0S_001
3D structure
- PDB id
- 7S0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S0S_001 not in the Motif Atlas
- Geometric match to IL_5J7L_245
- Geometric discrepancy: 0.0677
- The information below is about IL_5J7L_245
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_04021.2
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7S0S|1|C|G|21
7S0S|1|C|U|22
7S0S|1|C|G|23
7S0S|1|C|G|24
7S0S|1|C|A|25
7S0S|1|C|U|26
7S0S|1|C|G|27
*
7S0S|1|C|C|597
7S0S|1|C|U|598
7S0S|1|C|G|599
7S0S|1|C|A|600
7S0S|1|C|A|601
7S0S|1|C|A|602
7S0S|1|C|C|603
Current chains
- Chain C
- 23S rRNA
Nearby chains
- Chain S
- 50S ribosomal protein L20
- Chain U
- 50S ribosomal protein L22
- Chain c
- 50S ribosomal protein L32
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