3D structure

PDB id
7S0S (explore in PDB, NAKB, or RNA 3D Hub)
Description
M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.05 Å

Loop

Sequence
ACUCGG*CUGU
Length
10 nucleotides
Bulged bases
7S0S|1|C|G|2216
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7S0S_072 not in the Motif Atlas
Homologous match to IL_5J7L_307
Geometric discrepancy: 0.0682
The information below is about IL_5J7L_307
Detailed Annotation
Intercalated tWH
Broad Annotation
Intercalated tWH
Motif group
IL_76758.2
Basepair signature
cWW-L-R-L-cWW-L-L
Number of instances in this motif group
7

Unit IDs

7S0S|1|C|A|1887
7S0S|1|C|C|1888
7S0S|1|C|U|1889
7S0S|1|C|C|1890
7S0S|1|C|G|1891
7S0S|1|C|G|1892
*
7S0S|1|C|C|2214
7S0S|1|C|U|2215
7S0S|1|C|G|2216
7S0S|1|C|U|2217

Current chains

Chain C
23S rRNA

Nearby chains

Chain E
50S ribosomal protein L3
Chain M
50S ribosomal protein L14

Coloring options:


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