IL_7S0S_073

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7S0S|1|C|G|1917

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S0S_073 not in the Motif Atlas

Geometric match to IL_7RQB_068

Geometric discrepancy: 0.0854

The information below is about IL_7RQB_068

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

7S0S|1|C|C|1904
7S0S|1|C|G|1905
7S0S|1|C|U|1906
7S0S|1|C|A|1907
7S0S|1|C|A|1908
7S0S|1|C|C|1909
*
7S0S|1|C|G|1914
7S0S|1|C|G|1915
7S0S|1|C|A|1916
7S0S|1|C|G|1917
7S0S|1|C|A|1918
7S0S|1|C|A|1919
7S0S|1|C|G|1920

Current chains

Chain C

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L2