IL_7S0S_075

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

UGUAAG*CCCAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S0S_075 not in the Motif Atlas

Geometric match to IL_8ZA4_001

Geometric discrepancy: 0.2289

The information below is about IL_8ZA4_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76308.6

Basepair signature

cWW-tSH-tHW-tHS-cWW-cWW

Number of instances in this motif group

5

Unit IDs

7S0S|1|C|U|1937
7S0S|1|C|G|1938
7S0S|1|C|U|1939
7S0S|1|C|A|1940
7S0S|1|C|A|1941
7S0S|1|C|G|1942
*
7S0S|1|C|C|1952
7S0S|1|C|C|1953
7S0S|1|C|C|1954
7S0S|1|C|A|1955
7S0S|1|C|A|1956
7S0S|1|C|G|1957

Current chains

Chain C

23S rRNA

Nearby chains