IL_7S0S_083

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

AGGACC*GAGAAU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S0S_083 not in the Motif Atlas

Geometric match to IL_5TBW_026

Geometric discrepancy: 0.2796

The information below is about IL_5TBW_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_82488.1

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7S0S|1|C|A|2073
7S0S|1|C|G|2074
7S0S|1|C|G|2075
7S0S|1|C|A|2076
7S0S|1|C|C|2077
7S0S|1|C|C|2078
*
7S0S|1|C|G|2105
7S0S|1|C|A|2106
7S0S|1|C|G|2107
7S0S|1|C|A|2108
7S0S|1|C|A|2109
7S0S|1|C|U|2110

Current chains

Chain C

23S rRNA

Nearby chains