IL_7S0S_101

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S0S_101 not in the Motif Atlas

Homologous match to IL_5J7L_333

Geometric discrepancy: 0.0756

The information below is about IL_5J7L_333

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

7S0S|1|C|C|2574
7S0S|1|C|G|2575
7S0S|1|C|A|2576
7S0S|1|C|G|2577
*
7S0S|1|C|C|2588
7S0S|1|C|G|2589
7S0S|1|C|A|2590
7S0S|1|C|G|2591

Current chains

Chain C

23S rRNA

Nearby chains

Chain Y

50S ribosomal protein L27

Chain f

50S ribosomal protein L35