IL_7S0S_136

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GUGUAGGAUAGGUGGGAGA*UCGUUGUUGAAAUACCACUC

Length

39 nucleotides

Bulged bases

7S0S|1|C|U|2334, 7S0S|1|C|G|2338, 7S0S|1|C|U|2341, 7S0S|1|C|G|2343, 7S0S|1|C|G|2348, 7S0S|1|C|U|2395

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7S0S|1|C|G|2333
7S0S|1|C|U|2334
7S0S|1|C|G|2335
7S0S|1|C|U|2336
7S0S|1|C|A|2337
7S0S|1|C|G|2338
7S0S|1|C|G|2339
7S0S|1|C|A|2340
7S0S|1|C|U|2341
7S0S|1|C|A|2342
7S0S|1|C|G|2343
7S0S|1|C|G|2344
7S0S|1|C|U|2345
7S0S|1|C|G|2346
7S0S|1|C|G|2347
7S0S|1|C|G|2348
7S0S|1|C|A|2349
7S0S|1|C|G|2350
7S0S|1|C|A|2351
*
7S0S|1|C|U|2383
7S0S|1|C|C|2384
7S0S|1|C|G|2385
7S0S|1|C|U|2386
7S0S|1|C|U|2387
7S0S|1|C|G|2388
7S0S|1|C|U|2389
7S0S|1|C|U|2390
7S0S|1|C|G|2391
7S0S|1|C|A|2392
7S0S|1|C|A|2393
7S0S|1|C|A|2394
7S0S|1|C|U|2395
7S0S|1|C|A|2396
7S0S|1|C|C|2397
7S0S|1|C|C|2398
7S0S|1|C|A|2399
7S0S|1|C|C|2400
7S0S|1|C|U|2401
7S0S|1|C|C|2402

Current chains

Chain C

23S rRNA

Nearby chains