IL_7S1G_155

3D structure

PDB id

7S1G (explore in PDB, NAKB, or RNA 3D Hub)

Description

wild-type Escherichia coli stalled ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GUUC*GGC

Length

7 nucleotides

Bulged bases

7S1G|1|I|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S1G_155 not in the Motif Atlas

Geometric match to IL_3C3Z_002

Geometric discrepancy: 0.185

The information below is about IL_3C3Z_002

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_29925.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

10

Unit IDs

7S1G|1|I|G|2400
7S1G|1|I|U|2401
7S1G|1|I|U|2402
7S1G|1|I|C|2403
*
7S1G|1|I|G|2414
7S1G|1|I|G|2415
7S1G|1|I|C|2416

Current chains

Chain I

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L15

Chain j

50S ribosomal protein L33

Chain l

50S ribosomal protein L35