IL_7S1H_017

3D structure

PDB id

7S1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GG*UGACC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S1H_017 not in the Motif Atlas

Homologous match to IL_4LFB_013

Geometric discrepancy: 0.1323

The information below is about IL_4LFB_013

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.3

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

6

Unit IDs

7S1H|1|C|G|292
7S1H|1|C|G|293
*
7S1H|1|C|U|304
7S1H|1|C|G|305
7S1H|1|C|A|306
7S1H|1|C|C|307
7S1H|1|C|C|308

Current chains

Chain C

16S rRNA

Nearby chains

Chain x

30S ribosomal protein S16