3D structure

PDB id
7S1H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Wild-type Escherichia coli ribosome with antibiotic linezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.35 Å

Loop

Sequence
GUC*GUC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7S1H_061 not in the Motif Atlas
Geometric match to IL_5MWI_007
Geometric discrepancy: 0.1329
The information below is about IL_5MWI_007
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_44258.3
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
259

Unit IDs

7S1H|1|C|G|1405
7S1H|1|C|U|1406
7S1H|1|C|C|1407
*
7S1H|1|C|G|1494
7S1H|1|C|U|1495
7S1H|1|C|C|1496

Current chains

Chain C
16S rRNA

Nearby chains

Chain I
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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