IL_7S1K_151

3D structure

PDB id

7S1K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GUGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

7S1K|1|I|U|2111, 7S1K|1|I|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S1K_151 not in the Motif Atlas

Homologous match to IL_3U4M_002

Geometric discrepancy: 0.5736

The information below is about IL_3U4M_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32056.1

Basepair signature

cWW-L-cWW-L-L-tWH-R-L-R-L

Number of instances in this motif group

3

Unit IDs

7S1K|1|I|G|2110
7S1K|1|I|U|2111
7S1K|1|I|G|2112
7S1K|1|I|U|2113
7S1K|1|I|A|2114
7S1K|1|I|G|2115
7S1K|1|I|G|2116
7S1K|1|I|A|2117
7S1K|1|I|U|2118
7S1K|1|I|A|2119
7S1K|1|I|G|2120
*
7S1K|1|I|C|2178
7S1K|1|I|C|2179

Current chains

Chain I

23S rRNA

Nearby chains