IL_7S9U_024

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCU*GGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S9U_024 not in the Motif Atlas

Geometric match to IL_8P9A_292

Geometric discrepancy: 0.387

The information below is about IL_8P9A_292

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15698.4

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

10

Unit IDs

7S9U|1|A|C|884
7S9U|1|A|C|885
7S9U|1|A|U|886
*
7S9U|1|A|G|985
7S9U|1|A|G|986
7S9U|1|A|A|987
7S9U|1|A|G|988

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain L

50S ribosomal protein L15