IL_7S9U_025

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUAAG*UAUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S9U_025 not in the Motif Atlas

Homologous match to IL_4WF9_029

Geometric discrepancy: 0.2845

The information below is about IL_4WF9_029

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01742.1

Basepair signature

cWW-L-cWW-R-cWW

Number of instances in this motif group

3

Unit IDs

7S9U|1|A|G|891
7S9U|1|A|U|892
7S9U|1|A|A|893
7S9U|1|A|A|894
7S9U|1|A|G|895
*
7S9U|1|A|U|977
7S9U|1|A|A|978
7S9U|1|A|U|979
7S9U|1|A|C|980

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain Z

50S ribosomal protein L30