IL_7S9U_050

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUAG*UGAUU

Length

9 nucleotides

Bulged bases

7S9U|1|A|U|1602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S9U_050 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.2248

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7S9U|1|A|A|1483
7S9U|1|A|U|1484
7S9U|1|A|A|1485
7S9U|1|A|G|1486
*
7S9U|1|A|U|1599
7S9U|1|A|G|1600
7S9U|1|A|A|1601
7S9U|1|A|U|1602
7S9U|1|A|U|1603

Current chains

Chain A

RNA (2436-MER)

Nearby chains