IL_7S9U_080
3D structure
- PDB id
- 7S9U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 44SR3C ribosomal particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- ACGGGACGAACACCGAUAUGC*GAUUU
- Length
- 26 nucleotides
- Bulged bases
- 7S9U|1|A|G|63, 7S9U|1|A|U|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S9U_080 not in the Motif Atlas
- Geometric match to IL_5TBW_144
- Geometric discrepancy: 0.3055
- The information below is about IL_5TBW_144
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44998.1
- Basepair signature
- cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R
- Number of instances in this motif group
- 2
Unit IDs
7S9U|1|A|A|56
7S9U|1|A|C|57
7S9U|1|A|G|58
7S9U|1|A|G|59
7S9U|1|A|G|60
7S9U|1|A|A|61
7S9U|1|A|C|62
7S9U|1|A|G|63
7S9U|1|A|A|64
7S9U|1|A|A|65
7S9U|1|A|C|66
7S9U|1|A|A|67
7S9U|1|A|C|68
7S9U|1|A|C|69
7S9U|1|A|G|70
7S9U|1|A|A|71
7S9U|1|A|U|72
7S9U|1|A|A|73
7S9U|1|A|U|74
7S9U|1|A|G|75
7S9U|1|A|C|76
*
7S9U|1|A|G|109
7S9U|1|A|A|110
7S9U|1|A|U|111
7S9U|1|A|U|112
7S9U|1|A|U|113
Current chains
- Chain A
- RNA (2436-MER)
Nearby chains
- Chain T
- 50S ribosomal protein L23
- Chain Y
- 50S ribosomal protein L29
- Chain d
- 50S ribosomal protein L34
Coloring options: