IL_7SA4_053

3D structure

PDB id

7SA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

7SA4|1|1|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SA4_053 not in the Motif Atlas

Geometric match to IL_5J7L_297

Geometric discrepancy: 0.0668

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7SA4|1|1|C|1437
7SA4|1|1|U|1438
7SA4|1|1|A|1439
7SA4|1|1|U|1440
*
7SA4|1|1|A|1551
7SA4|1|1|A|1552
7SA4|1|1|A|1553
7SA4|1|1|U|1554
7SA4|1|1|G|1555

Current chains

Chain 1

23S ribosomal RNA

Nearby chains