IL_7SA4_139
3D structure
- PDB id
- 7SA4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Damaged 70S ribosome with PrfH bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- GA*UGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SA4_139 not in the Motif Atlas
- Geometric match to IL_4LFB_027
- Geometric discrepancy: 0.0681
- The information below is about IL_4LFB_027
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- Major groove platform
- Motif group
- IL_50694.7
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 27
Unit IDs
7SA4|1|2|G|654
7SA4|1|2|A|655
*
7SA4|1|2|U|751
7SA4|1|2|G|752
7SA4|1|2|A|753
7SA4|1|2|C|754
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain m
- 30S ribosomal protein S8
- Chain t
- 30S ribosomal protein S15
Coloring options: