IL_7SAE_007

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAACUG*CUAAGUAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SAE_007 not in the Motif Atlas

Geometric match to IL_7A0S_006

Geometric discrepancy: 0.1102

The information below is about IL_7A0S_006

Detailed Annotation

8x7 Sarcin-Ricin; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_62167.4

Basepair signature

cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

16

Unit IDs

7SAE|1|A|G|191
7SAE|1|A|G|192
7SAE|1|A|A|193
7SAE|1|A|A|194
7SAE|1|A|C|195
7SAE|1|A|U|196
7SAE|1|A|G|197
*
7SAE|1|A|C|204
7SAE|1|A|U|205
7SAE|1|A|A|206
7SAE|1|A|A|207
7SAE|1|A|G|208
7SAE|1|A|U|209
7SAE|1|A|A|210
7SAE|1|A|C|211

Current chains

Chain A

RNA (2434-MER)

Nearby chains