IL_7SAE_035

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

7SAE|1|A|A|1202

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SAE_035 not in the Motif Atlas

Homologous match to IL_4WF9_036

Geometric discrepancy: 0.0947

The information below is about IL_4WF9_036

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_08938.1

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

22

Unit IDs

7SAE|1|A|C|1044
7SAE|1|A|U|1045
7SAE|1|A|A|1046
7SAE|1|A|A|1047
7SAE|1|A|G|1048
*
7SAE|1|A|C|1199
7SAE|1|A|G|1200
7SAE|1|A|A|1201
7SAE|1|A|A|1202
7SAE|1|A|G|1203

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain Q

50S ribosomal protein L20

Chain R

50S ribosomal protein L21

Chain Z

50S ribosomal protein L30