IL_7SAE_063

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACUCGG*CUGU

Length

10 nucleotides

Bulged bases

7SAE|1|A|G|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SAE_063 not in the Motif Atlas

Homologous match to IL_4WF9_065

Geometric discrepancy: 0.1558

The information below is about IL_4WF9_065

Detailed Annotation

Intercalated tWH

Broad Annotation

Intercalated tWH

Motif group

IL_28217.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

10

Unit IDs

7SAE|1|A|A|1714
7SAE|1|A|C|1715
7SAE|1|A|U|1716
7SAE|1|A|C|1717
7SAE|1|A|G|1718
7SAE|1|A|G|1719
*
7SAE|1|A|C|2019
7SAE|1|A|U|2020
7SAE|1|A|G|2021
7SAE|1|A|U|2022

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain K

50S ribosomal protein L14