IL_7SAE_080

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAUAAG*UGAAGC

Length

12 nucleotides

Bulged bases

7SAE|1|A|A|2794

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SAE_080 not in the Motif Atlas

Homologous match to IL_5J7L_350

Geometric discrepancy: 0.1713

The information below is about IL_5J7L_350

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7SAE|1|A|G|2766
7SAE|1|A|A|2767
7SAE|1|A|U|2768
7SAE|1|A|A|2769
7SAE|1|A|A|2770
7SAE|1|A|G|2771
*
7SAE|1|A|U|2791
7SAE|1|A|G|2792
7SAE|1|A|A|2793
7SAE|1|A|A|2794
7SAE|1|A|G|2795
7SAE|1|A|C|2796

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain J

50S ribosomal protein L13