IL_7SFR_041
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUAAGUG*CUCAAG
- Length
- 13 nucleotides
- Bulged bases
- 7SFR|1|A|C|1271, 7SFR|1|A|A|1273
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SFR_041 not in the Motif Atlas
- Geometric match to IL_4V9F_040
- Geometric discrepancy: 0.0879
- The information below is about IL_4V9F_040
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.6
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 6
Unit IDs
7SFR|1|A|C|1147
7SFR|1|A|U|1148
7SFR|1|A|A|1149
7SFR|1|A|A|1150
7SFR|1|A|G|1151
7SFR|1|A|U|1152
7SFR|1|A|G|1153
*
7SFR|1|A|C|1269
7SFR|1|A|U|1270
7SFR|1|A|C|1271
7SFR|1|A|A|1272
7SFR|1|A|A|1273
7SFR|1|A|G|1274
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L13
- Chain v
- peptide
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