IL_7SFR_048
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CAGCGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 7SFR|1|A|C|1342
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SFR_048 not in the Motif Atlas
- Geometric match to IL_3U4M_004
- Geometric discrepancy: 0.1359
- The information below is about IL_3U4M_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90775.3
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 30
Unit IDs
7SFR|1|A|C|1339
7SFR|1|A|A|1340
7SFR|1|A|G|1341
7SFR|1|A|C|1342
7SFR|1|A|G|1343
7SFR|1|A|A|1344
7SFR|1|A|A|1345
7SFR|1|A|G|1346
*
7SFR|1|A|U|1365
7SFR|1|A|G|1366
7SFR|1|A|G|1367
7SFR|1|A|A|1368
7SFR|1|A|G|1369
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain Q
- 50S ribosomal protein L20
Coloring options: