IL_7SFR_104
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UUGAG*CAAGAUCAG
- Length
- 14 nucleotides
- Bulged bases
- 7SFR|1|A|C|3018
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SFR_104 not in the Motif Atlas
- Geometric match to IL_4WF9_099
- Geometric discrepancy: 0.0815
- The information below is about IL_4WF9_099
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.4
- Basepair signature
- cWW-tSH-tHW-tHS-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
7SFR|1|A|U|2874
7SFR|1|A|U|2875
7SFR|1|A|G|2876
7SFR|1|A|A|2877
7SFR|1|A|G|2878
*
7SFR|1|A|C|3012
7SFR|1|A|A|3013
7SFR|1|A|A|3014
7SFR|1|A|G|3015
7SFR|1|A|A|3016
7SFR|1|A|U|3017
7SFR|1|A|C|3018
7SFR|1|A|A|3019
7SFR|1|A|G|3020
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L13
Coloring options: