IL_7SFR_129
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAUAAG*UCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 7SFR|1|a|U|169
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SFR_129 not in the Motif Atlas
- Homologous match to IL_5J7L_012
- Geometric discrepancy: 0.1746
- The information below is about IL_5J7L_012
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7SFR|1|a|G|143
7SFR|1|a|G|144
7SFR|1|a|A|145
7SFR|1|a|U|146
7SFR|1|a|A|147
7SFR|1|a|A|148
7SFR|1|a|G|149
*
7SFR|1|a|U|164
7SFR|1|a|C|165
7SFR|1|a|U|166
7SFR|1|a|A|167
7SFR|1|a|A|168
7SFR|1|a|U|169
7SFR|1|a|A|170
7SFR|1|a|C|171
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain t
- 30S ribosomal protein S20
Coloring options: