IL_7SFR_136
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAUGACG*UGUAAAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SFR_136 not in the Motif Atlas
- Homologous match to IL_8B0X_019
- Geometric discrepancy: 0.483
- The information below is about IL_8B0X_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
7SFR|1|a|G|408
7SFR|1|a|G|409
7SFR|1|a|A|410
7SFR|1|a|U|411
7SFR|1|a|G|412
7SFR|1|a|A|413
7SFR|1|a|C|414
7SFR|1|a|G|415
*
7SFR|1|a|U|426
7SFR|1|a|G|427
7SFR|1|a|U|428
7SFR|1|a|A|429
7SFR|1|a|A|430
7SFR|1|a|A|431
7SFR|1|a|C|432
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
Coloring options: