IL_7SFR_164

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CGUCU*AUAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SFR_164 not in the Motif Atlas

Geometric match to IL_9JA9_001

Geometric discrepancy: 0.397

The information below is about IL_9JA9_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71154.5

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

17

Unit IDs

7SFR|1|a|C|1001
7SFR|1|a|G|1002
7SFR|1|a|U|1003
7SFR|1|a|C|1004
7SFR|1|a|U|1005
*
7SFR|1|a|A|1010
7SFR|1|a|U|1011
7SFR|1|a|A|1012
7SFR|1|a|G|1013
7SFR|1|a|G|1014

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

30S ribosomal protein S14 type Z

Chain s

30S ribosomal protein S19