IL_7SFR_176
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGGAUC*GUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SFR_176 not in the Motif Atlas
- Geometric match to IL_4LFB_055
- Geometric discrepancy: 0.1735
- The information below is about IL_4LFB_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28265.1
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7SFR|1|a|C|1295
7SFR|1|a|G|1296
7SFR|1|a|G|1297
7SFR|1|a|A|1298
7SFR|1|a|U|1299
7SFR|1|a|C|1300
*
7SFR|1|a|G|1321
7SFR|1|a|U|1322
7SFR|1|a|G|1323
7SFR|1|a|A|1324
7SFR|1|a|A|1325
7SFR|1|a|G|1326
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain m
- 30S ribosomal protein S13
Coloring options: