IL_7SSL_030

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGG*UACC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SSL_030 not in the Motif Atlas

Geometric match to IL_1XJR_003

Geometric discrepancy: 0.2365

The information below is about IL_1XJR_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7SSL|1|1|G|879
7SSL|1|1|G|880
7SSL|1|1|G|881
*
7SSL|1|1|U|895
7SSL|1|1|A|896
7SSL|1|1|C|897
7SSL|1|1|C|898

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 5

Transfer RNA; tRNA