IL_7SSL_032
3D structure
- PDB id
- 7SSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GCUAAG*CGAAGC
- Length
- 12 nucleotides
- Bulged bases
- 7SSL|1|1|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSL_032 not in the Motif Atlas
- Geometric match to IL_4WF9_104
- Geometric discrepancy: 0.2134
- The information below is about IL_4WF9_104
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_91079.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
7SSL|1|1|G|997
7SSL|1|1|C|998
7SSL|1|1|U|999
7SSL|1|1|A|1000
7SSL|1|1|A|1001
7SSL|1|1|G|1002
*
7SSL|1|1|C|1153
7SSL|1|1|G|1154
7SSL|1|1|A|1155
7SSL|1|1|A|1156
7SSL|1|1|G|1157
7SSL|1|1|C|1158
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 2
- 5S ribosomal RNA; 5S rRNA
- Chain q
- 50S ribosomal protein L20
- Chain r
- 50S ribosomal protein L21
- Chain z
- 50S ribosomal protein L30
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