IL_7SSL_139
3D structure
- PDB id
- 7SSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAG*CUGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSL_139 not in the Motif Atlas
- Geometric match to IL_4V9F_072
- Geometric discrepancy: 0.3516
- The information below is about IL_4V9F_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75527.2
- Basepair signature
- cWW-cWW-cSH-cWW
- Number of instances in this motif group
- 10
Unit IDs
7SSL|1|3|G|654
7SSL|1|3|A|655
7SSL|1|3|G|656
*
7SSL|1|3|C|750
7SSL|1|3|U|751
7SSL|1|3|G|752
7SSL|1|3|A|753
7SSL|1|3|C|754
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain M
- 30S ribosomal protein S8
- Chain T
- 30S ribosomal protein S15
Coloring options: