IL_7SSL_141
3D structure
- PDB id
- 7SSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUAGAG*UGGAC
- Length
- 11 nucleotides
- Bulged bases
- 7SSL|1|3|A|665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSL_141 not in the Motif Atlas
- Geometric match to IL_4LFB_065
- Geometric discrepancy: 0.354
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
7SSL|1|3|G|661
7SSL|1|3|U|662
7SSL|1|3|A|663
7SSL|1|3|G|664
7SSL|1|3|A|665
7SSL|1|3|G|666
*
7SSL|1|3|U|740
7SSL|1|3|G|741
7SSL|1|3|G|742
7SSL|1|3|A|743
7SSL|1|3|C|744
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain K
- 30S ribosomal protein S6
- Chain T
- 30S ribosomal protein S15
- Chain W
- 30S ribosomal protein S18
- Chain Z
- 30S ribosomal protein S21
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