IL_7SSL_181
3D structure
- PDB id
- 7SSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCUGCGAAG*UGGAGG
- Length
- 15 nucleotides
- Bulged bases
- 7SSL|1|1|C|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSL_181 not in the Motif Atlas
- Geometric match to IL_6HCT_001
- Geometric discrepancy: 0.213
- The information below is about IL_6HCT_001
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_74205.1
- Basepair signature
- cWW-cWW-tSS-tSH-L-tHS-R-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7SSL|1|1|C|1207
7SSL|1|1|C|1208
7SSL|1|1|U|1209
7SSL|1|1|G|1210
7SSL|1|1|C|1211
7SSL|1|1|G|1212
7SSL|1|1|A|1213
7SSL|1|1|A|1214
7SSL|1|1|G|1215
*
7SSL|1|1|U|1234
7SSL|1|1|G|1235
7SSL|1|1|G|1236
7SSL|1|1|A|1237
7SSL|1|1|G|1238
7SSL|1|1|G|1239
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain q
- 50S ribosomal protein L20
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