IL_7SSL_196
3D structure
- PDB id
- 7SSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUGUAG*CGUAGAGAU
- Length
- 15 nucleotides
- Bulged bases
- 7SSL|1|3|A|702
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSL_196 not in the Motif Atlas
- Homologous match to IL_4LFB_031
- Geometric discrepancy: 0.211
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7SSL|1|3|G|683
7SSL|1|3|U|684
7SSL|1|3|G|685
7SSL|1|3|U|686
7SSL|1|3|A|687
7SSL|1|3|G|688
*
7SSL|1|3|C|699
7SSL|1|3|G|700
7SSL|1|3|U|701
7SSL|1|3|A|702
7SSL|1|3|G|703
7SSL|1|3|A|704
7SSL|1|3|G|705
7SSL|1|3|A|706
7SSL|1|3|U|707
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- 30S ribosomal protein S11
- Chain b
- 50S ribosomal protein L2
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