IL_7SSO_124

3D structure

PDB id

7SSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*UGACC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SSO_124 not in the Motif Atlas

Homologous match to IL_6CZR_125

Geometric discrepancy: 0.1183

The information below is about IL_6CZR_125

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_99460.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

7SSO|1|3|G|292
7SSO|1|3|G|293
*
7SSO|1|3|U|304
7SSO|1|3|G|305
7SSO|1|3|A|306
7SSO|1|3|C|307
7SSO|1|3|C|308

Current chains

Chain 3

16S rRNA

Nearby chains

Chain U

30S ribosomal protein S16