IL_7SSO_181

3D structure

PDB id

7SSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

7SSO|1|1|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SSO_181 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.1348

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7SSO|1|1|C|1437
7SSO|1|1|U|1438
7SSO|1|1|A|1439
7SSO|1|1|U|1440
*
7SSO|1|1|A|1551
7SSO|1|1|A|1552
7SSO|1|1|A|1553
7SSO|1|1|U|1554
7SSO|1|1|G|1555

Current chains

Chain 1

23S rRNA

Nearby chains