IL_7SSW_092

3D structure

PDB id

7SSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G dissociated (Structure VI)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

7SSW|1|1|A|2572, 7SSW|1|1|C|2573

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SSW_092 not in the Motif Atlas

Geometric match to IL_4WF9_096

Geometric discrepancy: 0.1404

The information below is about IL_4WF9_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_44609.2

Basepair signature

cWW-cWW

Number of instances in this motif group

24

Unit IDs

7SSW|1|1|C|2512
7SSW|1|1|A|2513
*
7SSW|1|1|U|2571
7SSW|1|1|A|2572
7SSW|1|1|C|2573
7SSW|1|1|G|2574

Current chains

Chain 1

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L3

Chain j

50S ribosomal protein L13