IL_7SSW_132

3D structure

PDB id

7SSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G dissociated (Structure VI)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

7SSW|1|3|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SSW_132 not in the Motif Atlas

Homologous match to IL_4LFB_022

Geometric discrepancy: 0.1822

The information below is about IL_4LFB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_20847.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

7SSW|1|3|C|569
7SSW|1|3|G|570
7SSW|1|3|U|571
7SSW|1|3|A|572
7SSW|1|3|A|573
7SSW|1|3|A|574
7SSW|1|3|G|575
*
7SSW|1|3|C|880
7SSW|1|3|G|881

Current chains

Chain 3

16S rRNA

Nearby chains

Chain Q

30S ribosomal protein S12

Chain V

30S ribosomal protein S17