IL_7SSW_143
3D structure
- PDB id
- 7SSW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G dissociated (Structure VI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAGUACG*UAAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSW_143 not in the Motif Atlas
- Homologous match to IL_4LFB_034
- Geometric discrepancy: 0.1616
- The information below is about IL_4LFB_034
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_84044.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7SSW|1|3|G|887
7SSW|1|3|G|888
7SSW|1|3|A|889
7SSW|1|3|G|890
7SSW|1|3|U|891
7SSW|1|3|A|892
7SSW|1|3|C|893
7SSW|1|3|G|894
*
7SSW|1|3|U|905
7SSW|1|3|A|906
7SSW|1|3|A|907
7SSW|1|3|A|908
7SSW|1|3|A|909
7SSW|1|3|C|910
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain Q
- 30S ribosomal protein S12
Coloring options: