IL_7SSW_162
3D structure
- PDB id
- 7SSW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G dissociated (Structure VI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGGAUUGG*CCAUGAAG
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSW_162 not in the Motif Atlas
- Geometric match to IL_4WF9_119
- Geometric discrepancy: 0.3597
- The information below is about IL_4WF9_119
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_00087.1
- Basepair signature
- cWW-L-R-tSH-L-cWS-R-L-R-L-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
7SSW|1|3|C|1303
7SSW|1|3|G|1304
7SSW|1|3|G|1305
7SSW|1|3|A|1306
7SSW|1|3|U|1307
7SSW|1|3|U|1308
7SSW|1|3|G|1309
7SSW|1|3|G|1310
*
7SSW|1|3|C|1327
7SSW|1|3|C|1328
7SSW|1|3|A|1329
7SSW|1|3|U|1330
7SSW|1|3|G|1331
7SSW|1|3|A|1332
7SSW|1|3|A|1333
7SSW|1|3|G|1334
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain R
- 30S ribosomal protein S13
- Chain X
- 30S ribosomal protein S19
Coloring options: