IL_7ST2_031

3D structure

PDB id

7ST2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGG*UACC

Length

7 nucleotides

Bulged bases

7ST2|1|1|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ST2_031 not in the Motif Atlas

Geometric match to IL_4P3T_005

Geometric discrepancy: 0.2644

The information below is about IL_4P3T_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_10289.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

237

Unit IDs

7ST2|1|1|G|879
7ST2|1|1|G|880
7ST2|1|1|G|881
*
7ST2|1|1|U|895
7ST2|1|1|A|896
7ST2|1|1|C|897
7ST2|1|1|C|898

Current chains

Chain 1

23S rRNA

Nearby chains