IL_7ST6_019

3D structure

PDB id

7ST6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation, non-rotated 70S ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ST6_019 not in the Motif Atlas

Geometric match to IL_5J7L_263

Geometric discrepancy: 0.1197

The information below is about IL_5J7L_263

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

7ST6|1|1|U|703
7ST6|1|1|G|704
7ST6|1|1|A|705
7ST6|1|1|A|706
7ST6|1|1|G|707
*
7ST6|1|1|U|724
7ST6|1|1|G|725
7ST6|1|1|G|726
7ST6|1|1|A|727
7ST6|1|1|G|728

Current chains

Chain 1

23S rRNA

Nearby chains

Chain b

50S ribosomal protein L2