IL_7ST6_176

3D structure

PDB id

7ST6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation, non-rotated 70S ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUU*GGAC

Length

7 nucleotides

Bulged bases

7ST6|1|1|G|729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ST6_176 not in the Motif Atlas

Geometric match to IL_1Y27_001

Geometric discrepancy: 0.2234

The information below is about IL_1Y27_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

7ST6|1|1|G|701
7ST6|1|1|U|702
7ST6|1|1|U|703
*
7ST6|1|1|G|728
7ST6|1|1|G|729
7ST6|1|1|A|730
7ST6|1|1|C|731

Current chains

Chain 1

23S rRNA

Nearby chains

Chain b

50S ribosomal protein L2