IL_7ST7_132
3D structure
- PDB id
- 7ST7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAGGG*CAUUGAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ST7_132 not in the Motif Atlas
- Homologous match to IL_5J7L_023
- Geometric discrepancy: 0.1321
- The information below is about IL_5J7L_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70801.1
- Basepair signature
- cWW-cWW-L-R-tWW-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
7ST7|1|3|G|450
7ST7|1|3|A|451
7ST7|1|3|A|452
7ST7|1|3|G|453
7ST7|1|3|G|454
7ST7|1|3|G|455
*
7ST7|1|3|C|477
7ST7|1|3|A|478
7ST7|1|3|U|479
7ST7|1|3|U|480
7ST7|1|3|G|481
7ST7|1|3|A|482
7ST7|1|3|C|483
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain U
- 30S ribosomal protein S16
Coloring options: